Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Gm38317-201ENSMUST00000195564 343 ntBASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Gm38092-201ENSMUST00000195600 653 ntBASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Gm44967-201ENSMUST00000207047 631 ntBASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Gm45925-201ENSMUST00000218882 744 ntBASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.33■□□□□ 0.04
Ripk4Q9ERK0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Gm25214-201ENSMUST00000104573 129 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Gm12058-201ENSMUST00000118614 437 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Gm12291-201ENSMUST00000121627 311 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Gm27046-201ENSMUST00000182160 463 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Rps4l-202ENSMUST00000204242 789 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ripk4Q9ERK0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm14130-201ENSMUST00000118417 987 ntBASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm14921-201ENSMUST00000118643 908 ntBASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm3096-201ENSMUST00000185770 364 ntBASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ripk4Q9ERK0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms