Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.46■□□□□ 0.22
U2af1Q9D883 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
U2af1Q9D883 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Mir877-201ENSMUST00000104738 85 ntBASIC16.45■□□□□ 0.22
U2af1Q9D883 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm27046-201ENSMUST00000182160 463 ntBASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.45■□□□□ 0.22
U2af1Q9D883 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
U2af1Q9D883 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
U2af1Q9D883 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Gm15808-201ENSMUST00000119046 604 ntBASIC16.44■□□□□ 0.22
U2af1Q9D883 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Gm8885-201ENSMUST00000189382 598 ntBASIC16.44■□□□□ 0.22
U2af1Q9D883 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
U2af1Q9D883 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
U2af1Q9D883 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm18227-201ENSMUST00000211082 1468 ntBASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.43■□□□□ 0.22
U2af1Q9D883 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.43■□□□□ 0.22
U2af1Q9D883 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
U2af1Q9D883 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm14109-201ENSMUST00000118814 309 ntBASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.43■□□□□ 0.22
U2af1Q9D883 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
U2af1Q9D883 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm44967-201ENSMUST00000207047 631 ntBASIC16.43■□□□□ 0.22
U2af1Q9D883 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
U2af1Q9D883 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms