Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.94□□□□□ -0.02
Stag1Q9D3E6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Stag1Q9D3E6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Gm9083-201ENSMUST00000120423 819 ntBASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.93□□□□□ -0.02
Stag1Q9D3E6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stag1Q9D3E6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Gm9022-201ENSMUST00000182482 992 ntBASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stag1Q9D3E6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm27552-201ENSMUST00000183351 62 ntBASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm27844-201ENSMUST00000183613 62 ntBASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm37666-201ENSMUST00000194110 866 ntBASIC14.91□□□□□ -0.02
Stag1Q9D3E6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms