Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gm24694-201ENSMUST00000180054 110 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gm27437-201ENSMUST00000183429 107 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gm27663-201ENSMUST00000184839 110 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Mir6977-201ENSMUST00000184960 64 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Syt7-204ENSMUST00000223586 1344 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim13Q9CYB0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim13Q9CYB0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.58□□□□□ -0.55
Trim13Q9CYB0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim13Q9CYB0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm15321-201ENSMUST00000121290 288 ntBASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm19087-201ENSMUST00000191430 946 ntBASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms