Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Gm17794-201ENSMUST00000220252 955 ntBASIC14.73□□□□□ -0.05
Smc3Q9CW03 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.72□□□□□ -0.05
Smc3Q9CW03 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Gm12363-201ENSMUST00000122250 668 ntBASIC14.72□□□□□ -0.05
Smc3Q9CW03 Gm22331-201ENSMUST00000158066 136 ntBASIC14.72□□□□□ -0.05
Smc3Q9CW03 Gm27892-201ENSMUST00000185017 106 ntBASIC14.72□□□□□ -0.05
Smc3Q9CW03 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Gm4768-201ENSMUST00000206199 686 ntBASIC14.72□□□□□ -0.05
Smc3Q9CW03 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Gm32025-201ENSMUST00000217960 307 ntBASIC14.72□□□□□ -0.05
Smc3Q9CW03 Gm19163-201ENSMUST00000223313 780 ntBASIC14.72□□□□□ -0.05
Smc3Q9CW03 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc3Q9CW03 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gm12138-201ENSMUST00000122180 951 ntBASIC14.71□□□□□ -0.05
Smc3Q9CW03 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.71□□□□□ -0.05
Smc3Q9CW03 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.71□□□□□ -0.05
Smc3Q9CW03 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc3Q9CW03 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smc3Q9CW03 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smc3Q9CW03 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smc3Q9CW03 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smc3Q9CW03 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.7□□□□□ -0.06
Smc3Q9CW03 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.7□□□□□ -0.06
Smc3Q9CW03 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms