Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gm7584-201ENSMUST00000175829 940 ntBASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2ird2Q99NI3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Gm27023-201ENSMUST00000182372 285 ntBASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Gm37201-201ENSMUST00000191845 523 ntBASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2ird2Q99NI3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gtf2ird2Q99NI3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gtf2ird2Q99NI3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Gm24255-201ENSMUST00000104481 128 ntBASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Gm20482-202ENSMUST00000174729 825 ntBASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2ird2Q99NI3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms