Protein–RNA interactions for Protein: Q99L43

Cds2, Phosphatidate cytidylyltransferase 2, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cds2Q99L43 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cds2Q99L43 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.19□□□□□ -0.78
Cds2Q99L43 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.19□□□□□ -0.78
Cds2Q99L43 Gm22189-201ENSMUST00000103822 86 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cds2Q99L43 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Gm13689-201ENSMUST00000119360 685 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.19□□□□□ -0.78
Cds2Q99L43 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Mir8102-201ENSMUST00000184148 139 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Gm44397-201ENSMUST00000195950 113 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.19□□□□□ -0.78
Cds2Q99L43 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.19□□□□□ -0.78
Cds2Q99L43 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cds2Q99L43 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cds2Q99L43 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cds2Q99L43 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.19□□□□□ -0.78
Cds2Q99L43 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.18□□□□□ -0.78
Cds2Q99L43 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm5687-201ENSMUST00000118252 640 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.18□□□□□ -0.78
Cds2Q99L43 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm6983-201ENSMUST00000214912 628 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm19220-201ENSMUST00000222682 803 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.18□□□□□ -0.78
Cds2Q99L43 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm16372-201ENSMUST00000073088 450 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.18□□□□□ -0.78
Cds2Q99L43 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cds2Q99L43 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cds2Q99L43 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.17□□□□□ -0.78
Cds2Q99L43 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cds2Q99L43 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cds2Q99L43 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cds2Q99L43 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.17□□□□□ -0.78
Cds2Q99L43 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cds2Q99L43 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms