Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Vmp1Q99KU0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmp1Q99KU0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Gm2231-201ENSMUST00000125661 612 ntBASIC12.13□□□□□ -0.47
Vmp1Q99KU0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Gm10146-201ENSMUST00000072739 309 ntBASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms