Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm44882-201ENSMUST00000205702 802 ntBASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.43□□□□□ -0.58
Lims1Q99JW4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Paupar-201ENSMUST00000194826 3482 ntBASIC11.43□□□□□ -0.58
Lims1Q99JW4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Rmrp-201ENSMUST00000157463 271 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Mir1938-201ENSMUST00000158746 100 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm8602-201ENSMUST00000184045 607 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm4768-201ENSMUST00000206199 686 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm10146-201ENSMUST00000072739 309 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm24526-201ENSMUST00000082921 158 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.42□□□□□ -0.58
Lims1Q99JW4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lims1Q99JW4 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm13829-201ENSMUST00000119600 138 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms