Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb18Q91Y02 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb18Q91Y02 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb18Q91Y02 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb18Q91Y02 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb18Q91Y02 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gm14208-201ENSMUST00000119645 678 ntBASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gm12566-201ENSMUST00000121479 359 ntBASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Pcdhb18Q91Y02 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Gm16296-201ENSMUST00000159905 325 ntBASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Gm28450-201ENSMUST00000187349 638 ntBASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb18Q91Y02 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms