Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lin28aQ8K3Y3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm11222-201ENSMUST00000119005 738 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm14726-201ENSMUST00000120623 896 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm11597-201ENSMUST00000121423 964 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm8018-201ENSMUST00000173536 789 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm37201-201ENSMUST00000191845 523 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm18041-201ENSMUST00000218210 618 ntBASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lin28aQ8K3Y3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm15808-201ENSMUST00000119046 604 ntBASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm13315-201ENSMUST00000120376 991 ntBASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm4857-201ENSMUST00000192718 785 ntBASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.71□□□□□ -0.53
Lin28aQ8K3Y3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms