Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm10478-201ENSMUST00000084451 396 ntBASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfwd3Q8CIK8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gm13492-201ENSMUST00000119772 665 ntBASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gm16296-201ENSMUST00000159905 325 ntBASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfwd3Q8CIK8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm43133-201ENSMUST00000197472 463 ntBASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm18054-201ENSMUST00000207539 555 ntBASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm9899-201ENSMUST00000065519 555 ntBASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms