Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clip4Q8CI96 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Gm10478-201ENSMUST00000084451 396 ntBASIC12.64□□□□□ -0.39
Clip4Q8CI96 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.64□□□□□ -0.39
Clip4Q8CI96 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip4Q8CI96 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Mir686-201ENSMUST00000102174 109 ntBASIC12.63□□□□□ -0.39
Clip4Q8CI96 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Gm26185-201ENSMUST00000157692 266 ntBASIC12.63□□□□□ -0.39
Clip4Q8CI96 Mir1938-201ENSMUST00000158746 100 ntBASIC12.63□□□□□ -0.39
Clip4Q8CI96 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Snora73a-201ENSMUST00000082453 205 ntBASIC12.63□□□□□ -0.39
Clip4Q8CI96 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip4Q8CI96 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.63□□□□□ -0.39
Clip4Q8CI96 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.63□□□□□ -0.39
Clip4Q8CI96 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip4Q8CI96 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.62□□□□□ -0.39
Clip4Q8CI96 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.62□□□□□ -0.39
Clip4Q8CI96 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms