Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm25063-201ENSMUST00000104666 94 ntBASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm11354-201ENSMUST00000121974 422 ntBASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm8531-201ENSMUST00000188319 893 ntBASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zc3h3Q8CHP0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm12943-201ENSMUST00000119616 210 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm12783-201ENSMUST00000121425 397 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm25604-201ENSMUST00000158359 133 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm29410-201ENSMUST00000188383 694 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm5100-201ENSMUST00000195631 589 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm44158-201ENSMUST00000203881 505 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm4604-201ENSMUST00000025040 390 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zc3h3Q8CHP0 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Gm24398-201ENSMUST00000157870 109 ntBASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.18□□□□□ -0.46
Zc3h3Q8CHP0 Gm4654-201ENSMUST00000183305 982 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms