Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab43Q8CG50 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
Rab43Q8CG50 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm23200-201ENSMUST00000104379 132 ntBASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm14263-201ENSMUST00000117955 746 ntBASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm11597-201ENSMUST00000121423 964 ntBASIC12.25□□□□□ -0.45
Rab43Q8CG50 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm24749-201ENSMUST00000157838 343 ntBASIC12.25□□□□□ -0.45
Rab43Q8CG50 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab43Q8CG50 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Gm11331-201ENSMUST00000119764 288 ntBASIC12.24□□□□□ -0.45
Rab43Q8CG50 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.24□□□□□ -0.45
Rab43Q8CG50 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.24□□□□□ -0.45
Rab43Q8CG50 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab43Q8CG50 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab43Q8CG50 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms