Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc28bQ8CEG5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc28bQ8CEG5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc28bQ8CEG5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc28bQ8CEG5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Gm23935-201ENSMUST00000102303 57 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Gm24270-201ENSMUST00000102326 57 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Gm24245-201ENSMUST00000157318 57 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Itm2b-204ENSMUST00000228637 783 ntBASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc28bQ8CEG5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm15487-201ENSMUST00000122373 465 ntBASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm24694-201ENSMUST00000180054 110 ntBASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm27989-201ENSMUST00000184721 107 ntBASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm27663-201ENSMUST00000184839 110 ntBASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28bQ8CEG5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc28bQ8CEG5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms