Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rsph6aQ8CDR2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Gm9083-201ENSMUST00000120423 819 ntBASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Gm24749-201ENSMUST00000157838 343 ntBASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Gm8385-201ENSMUST00000058999 643 ntBASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Gm26035-201ENSMUST00000083065 308 ntBASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rsph6aQ8CDR2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Gm23200-201ENSMUST00000104379 132 ntBASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Gm25025-201ENSMUST00000175018 111 ntBASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rsph6aQ8CDR2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rsph6aQ8CDR2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
Rsph6aQ8CDR2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Mir5120-201ENSMUST00000175020 78 ntBASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm44548-201ENSMUST00000208929 192 ntBASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm45433-201ENSMUST00000209386 247 ntBASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm9996-201ENSMUST00000070359 913 ntBASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rsph6aQ8CDR2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rsph6aQ8CDR2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms