Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Rubie-203ENSMUST00000227803 2430 ntBASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Gm12390-201ENSMUST00000117897 397 ntBASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Mir339-201ENSMUST00000083659 96 ntBASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Gm28693-202ENSMUST00000190758 331 ntBASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Gm18062-201ENSMUST00000208020 547 ntBASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Gm18055-201ENSMUST00000208254 547 ntBASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Gm16372-201ENSMUST00000073088 450 ntBASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Gm6091-201ENSMUST00000098307 165 ntBASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc87Q8CDL9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm14921-201ENSMUST00000118643 908 ntBASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm29649-201ENSMUST00000185649 419 ntBASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm8227-201ENSMUST00000223306 571 ntBASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm10012-201ENSMUST00000078252 192 ntBASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms