Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Gm6963-201ENSMUST00000147879 379 ntBASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx1Q8C8B0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm5070-201ENSMUST00000177599 862 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm25890-201ENSMUST00000177643 165 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm22614-201ENSMUST00000178300 165 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm6082-201ENSMUST00000215204 454 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm22042-201ENSMUST00000082989 165 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm26110-201ENSMUST00000083971 165 ntBASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx1Q8C8B0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Gm15276-201ENSMUST00000145953 498 ntBASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Gm9257-201ENSMUST00000221254 232 ntBASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx1Q8C8B0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms