Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Gm27627-201ENSMUST00000183644 150 ntBASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Gm45598-202ENSMUST00000210719 986 ntBASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Gm10179-201ENSMUST00000086233 688 ntBASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ptcd1Q8C2E4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ptcd1Q8C2E4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.46■□□□□ 0.06
Ptcd1Q8C2E4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ptcd1Q8C2E4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ptcd1Q8C2E4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm13888-201ENSMUST00000119148 422 ntBASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm19353-201ENSMUST00000184561 445 ntBASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm8285-201ENSMUST00000208293 759 ntBASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ptcd1Q8C2E4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Gm16397-201ENSMUST00000122201 494 ntBASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ptcd1Q8C2E4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptcd1Q8C2E4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms