Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Gstp-ps-201ENSMUST00000195526 631 ntBASIC17.61■□□□□ 0.41
Usp47Q8BY87 Gm44882-201ENSMUST00000205702 802 ntBASIC17.61■□□□□ 0.41
Usp47Q8BY87 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp47Q8BY87 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp47Q8BY87 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Gm5780-201ENSMUST00000217774 1834 ntBASIC17.61■□□□□ 0.41
Usp47Q8BY87 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp47Q8BY87 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.6■□□□□ 0.41
Usp47Q8BY87 Gm44758-201ENSMUST00000206096 2068 ntBASIC17.6■□□□□ 0.41
Usp47Q8BY87 Gm14028-201ENSMUST00000117434 479 ntBASIC17.6■□□□□ 0.41
Usp47Q8BY87 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Gm17812-201ENSMUST00000204935 318 ntBASIC17.6■□□□□ 0.41
Usp47Q8BY87 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Usp47Q8BY87 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp47Q8BY87 AC098716.1-201ENSMUST00000213527 703 ntBASIC17.59■□□□□ 0.41
Usp47Q8BY87 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.59■□□□□ 0.41
Usp47Q8BY87 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp47Q8BY87 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp47Q8BY87 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp47Q8BY87 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC17.58■□□□□ 0.41
Usp47Q8BY87 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
Usp47Q8BY87 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp47Q8BY87 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp47Q8BY87 Gm17435-202ENSMUST00000212699 1998 ntBASIC17.58■□□□□ 0.41
Usp47Q8BY87 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Gm5616-201ENSMUST00000165252 384 ntBASIC17.58■□□□□ 0.4
Usp47Q8BY87 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Gm8741-201ENSMUST00000174736 384 ntBASIC17.58■□□□□ 0.4
Usp47Q8BY87 Mir3547-201ENSMUST00000175461 88 ntBASIC17.58■□□□□ 0.4
Usp47Q8BY87 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms