Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Gm16177-201ENSMUST00000120728 718 ntBASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trerf1Q8BXJ2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm12384-201ENSMUST00000119228 919 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm4271-201ENSMUST00000174444 973 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm40466-201ENSMUST00000212174 422 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm10146-201ENSMUST00000072739 309 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.29□□□□□ -0.28
Trerf1Q8BXJ2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms