Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.6□□□□□ -0.39
Usp8Q80U87 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.6□□□□□ -0.39
Usp8Q80U87 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.6□□□□□ -0.39
Usp8Q80U87 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.6□□□□□ -0.39
Usp8Q80U87 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.6□□□□□ -0.39
Usp8Q80U87 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.6□□□□□ -0.39
Usp8Q80U87 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp8Q80U87 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Usp8Q80U87 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.59□□□□□ -0.39
Usp8Q80U87 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.59□□□□□ -0.39
Usp8Q80U87 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Usp8Q80U87 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm11803-201ENSMUST00000119966 444 ntBASIC12.59□□□□□ -0.39
Usp8Q80U87 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp8Q80U87 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.59□□□□□ -0.39
Usp8Q80U87 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms