Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup98Q6PFD9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Gm9062-201ENSMUST00000117712 727 ntBASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Gm13263-201ENSMUST00000121271 838 ntBASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Gm45575-201ENSMUST00000210283 548 ntBASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nup98Q6PFD9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gm8731-201ENSMUST00000118088 412 ntBASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gm15131-201ENSMUST00000119124 595 ntBASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nup98Q6PFD9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.52□□□□□ -0.09
Nup98Q6PFD9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Gm13461-201ENSMUST00000120980 662 ntBASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Gm44124-201ENSMUST00000204159 472 ntBASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Gm10179-201ENSMUST00000086233 688 ntBASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Nup98Q6PFD9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nup98Q6PFD9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.5□□□□□ -0.09
Nup98Q6PFD9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.5□□□□□ -0.09
Nup98Q6PFD9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup98Q6PFD9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms