Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Snrnp40Q6PE01 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Snrnp40Q6PE01 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Snrnp40Q6PE01 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Snrnp40Q6PE01 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm23596-201ENSMUST00000104304 132 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Mir6546-201ENSMUST00000184460 62 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm5733-201ENSMUST00000190232 939 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Ginm1-202ENSMUST00000065124 300 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Snrnp40Q6PE01 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm38355-201ENSMUST00000192514 1570 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm24934-201ENSMUST00000103764 111 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm13394-201ENSMUST00000121658 1000 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm16397-201ENSMUST00000122201 494 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm6905-201ENSMUST00000205729 511 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 CT009713.8-202ENSMUST00000224732 385 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11□□□□□ -0.65
Snrnp40Q6PE01 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms