Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf220Q6PDX6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Rnf220Q6PDX6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf220Q6PDX6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.9□□□□□ -0.51
Rnf220Q6PDX6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm4875-201ENSMUST00000118257 786 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm27390-201ENSMUST00000184516 176 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm17837-201ENSMUST00000186435 985 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm9063-201ENSMUST00000223299 582 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.89□□□□□ -0.51
Rnf220Q6PDX6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Gm13223-201ENSMUST00000118609 747 ntBASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Mir7221-201ENSMUST00000184009 72 ntBASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Gm17330-201ENSMUST00000221047 165 ntBASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf220Q6PDX6 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms