Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Gm8805-201ENSMUST00000117848 313 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Gm8213-201ENSMUST00000118191 441 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Gm13123-201ENSMUST00000122173 492 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gm37922-201ENSMUST00000195596 455 ntBASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gm18018-201ENSMUST00000198273 408 ntBASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gm8598-201ENSMUST00000221184 836 ntBASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Paupar-201ENSMUST00000194826 3482 ntBASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smarcd3Q6P9Z1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm10156-201ENSMUST00000122364 462 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms