Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 AC115122.1-201ENSMUST00000224850 1040 ntBASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slx4Q6P1D7 Gm26013-201ENSMUST00000104404 119 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm3150-201ENSMUST00000166418 204 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm22877-201ENSMUST00000175451 105 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm17798-201ENSMUST00000182282 1035 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm29410-201ENSMUST00000188383 694 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm43692-201ENSMUST00000198236 1062 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm37859-201ENSMUST00000195529 2173 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 AC159376.1-201ENSMUST00000218504 630 ntBASIC18.93■□□□□ 0.62
Slx4Q6P1D7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Slx4Q6P1D7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slx4Q6P1D7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Slx4Q6P1D7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC18.91■□□□□ 0.62
Slx4Q6P1D7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slx4Q6P1D7 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.91■□□□□ 0.62
Slx4Q6P1D7 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slx4Q6P1D7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slx4Q6P1D7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slx4Q6P1D7 Gm11422-201ENSMUST00000118925 1103 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms