Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm44152-201ENSMUST00000205007 1691 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Gli3Q61602 Mir1905-201ENSMUST00000122779 82 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Gli3Q61602 Gm43997-201ENSMUST00000203986 1005 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Gm2553-201ENSMUST00000215986 605 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 CT009546.1-201ENSMUST00000222573 1120 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Gm26670-202ENSMUST00000226862 340 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Gli3Q61602 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.43■□□□□ 0.22
Gli3Q61602 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Gli3Q61602 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.43■□□□□ 0.22
Gli3Q61602 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Gli3Q61602 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.43■□□□□ 0.22
Gli3Q61602 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Gli3Q61602 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Gm23604-201ENSMUST00000104311 132 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Gm26976-201ENSMUST00000182929 908 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
Gli3Q61602 Gm5267-201ENSMUST00000191574 1045 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Gm33707-201ENSMUST00000195135 569 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC16.43■□□□□ 0.22
Gli3Q61602 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gli3Q61602 AC187103.3-201ENSMUST00000225725 646 ntBASIC16.43■□□□□ 0.22
Gli3Q61602 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.42■□□□□ 0.22
Gli3Q61602 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gli3Q61602 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gli3Q61602 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC16.42■□□□□ 0.22
Gli3Q61602 Gm25830-201ENSMUST00000158923 132 ntBASIC16.42■□□□□ 0.22
Gli3Q61602 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Gm26875-201ENSMUST00000181006 950 ntBASIC16.42■□□□□ 0.22
Gli3Q61602 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Gm5449-201ENSMUST00000081132 357 ntBASIC16.42■□□□□ 0.22
Gli3Q61602 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gli3Q61602 Gm18782-201ENSMUST00000209023 1399 ntBASIC16.42■□□□□ 0.22
Gli3Q61602 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gli3Q61602 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.41■□□□□ 0.22
Gli3Q61602 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Smok4a-201ENSMUST00000074512 1455 ntBASIC16.41■□□□□ 0.22
Gli3Q61602 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC16.41■□□□□ 0.22
Gli3Q61602 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Gm16030-201ENSMUST00000159098 603 ntBASIC16.41■□□□□ 0.22
Gli3Q61602 Gm7504-201ENSMUST00000201449 424 ntBASIC16.41■□□□□ 0.22
Gli3Q61602 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 AC129975.1-201ENSMUST00000224816 592 ntBASIC16.41■□□□□ 0.22
Gli3Q61602 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gli3Q61602 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gli3Q61602 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms