Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Mir874-201ENSMUST00000104769 76 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm14481-201ENSMUST00000117178 629 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm13226-201ENSMUST00000117838 404 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm25927-201ENSMUST00000175058 117 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm18348-201ENSMUST00000191227 820 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm45299-202ENSMUST00000211011 765 ntTSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Foxc1Q61572 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm34165-201ENSMUST00000222012 1174 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm45885-202ENSMUST00000211520 1383 ntBASIC9.48□□□□□ -0.89
Foxc1Q61572 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Foxc1Q61572 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Foxc1Q61572 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms