Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm8885-201ENSMUST00000189382 598 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm42937-201ENSMUST00000197360 752 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm44958-201ENSMUST00000203734 736 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm10312-201ENSMUST00000078515 489 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm24830-201ENSMUST00000102024 166 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Mir877-201ENSMUST00000104738 85 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm9083-201ENSMUST00000120423 819 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm25890-201ENSMUST00000177643 165 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm22614-201ENSMUST00000178300 165 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm38241-201ENSMUST00000192641 898 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm4857-201ENSMUST00000192718 785 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm38317-201ENSMUST00000195564 343 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm22042-201ENSMUST00000082989 165 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm26232-201ENSMUST00000083360 166 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm26110-201ENSMUST00000083971 165 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd1Q61466 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.03□□□□□ -0.32
Smarcd1Q61466 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms