Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vsx2Q61412 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.24□□□□□ -0.45
Vsx2Q61412 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.24□□□□□ -0.45
Vsx2Q61412 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.23□□□□□ -0.45
Vsx2Q61412 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Pck2-205ENSMUST00000226352 2784 ntBASIC12.23□□□□□ -0.45
Vsx2Q61412 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm22121-201ENSMUST00000175148 54 ntBASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm18054-201ENSMUST00000207539 555 ntBASIC12.23□□□□□ -0.45
Vsx2Q61412 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.23□□□□□ -0.45
Vsx2Q61412 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx2Q61412 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx2Q61412 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Gm7809-201ENSMUST00000153199 742 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Gm32025-201ENSMUST00000217960 307 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Gm19309-201ENSMUST00000218295 205 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.22□□□□□ -0.45
Vsx2Q61412 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms