Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88aQ5SNZ0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm14999-201ENSMUST00000121039 624 ntBASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc88aQ5SNZ0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm12015-201ENSMUST00000117065 843 ntBASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm14460-201ENSMUST00000121511 639 ntBASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc88aQ5SNZ0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms