Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Gm14644-201ENSMUST00000116671 647 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Gm13296-201ENSMUST00000117854 997 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Gm11439-201ENSMUST00000118598 409 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Gm26461-201ENSMUST00000175064 290 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Gm44262-201ENSMUST00000204969 372 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.65□□□□□ -0.06
Prpf38aQ4FK66 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.07
Prpf38aQ4FK66 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Prpf38aQ4FK66 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Gm45224-201ENSMUST00000208203 414 ntBASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38aQ4FK66 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm14028-201ENSMUST00000117434 479 ntBASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm14760-201ENSMUST00000121831 999 ntBASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm27341-201ENSMUST00000183570 106 ntBASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Mir7070-201ENSMUST00000183657 86 ntBASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm32999-201ENSMUST00000192693 562 ntBASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38aQ4FK66 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms