Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm18123-201ENSMUST00000210874 822 ntBASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Spg11Q3UHA3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm16459-201ENSMUST00000121443 686 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm17192-201ENSMUST00000169031 511 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm45094-201ENSMUST00000207013 617 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm6331-201ENSMUST00000217890 450 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.47□□□□□ -0.57
Spg11Q3UHA3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm24844-201ENSMUST00000158679 127 ntBASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Spg11Q3UHA3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms