Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.77□□□□□ -0.04
Limch1Q3UH68 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Limch1Q3UH68 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Limch1Q3UH68 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.77□□□□□ -0.04
Limch1Q3UH68 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Limch1Q3UH68 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Limch1Q3UH68 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Limch1Q3UH68 Gm13297-201ENSMUST00000120205 934 ntBASIC14.77□□□□□ -0.05
Limch1Q3UH68 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Limch1Q3UH68 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm6621-201ENSMUST00000193251 772 ntBASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm37466-201ENSMUST00000195692 652 ntBASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Limch1Q3UH68 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm24255-201ENSMUST00000104481 128 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm7809-201ENSMUST00000153199 742 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm16296-201ENSMUST00000159905 325 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm16570-201ENSMUST00000161951 436 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm27320-201ENSMUST00000184892 109 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm7046-201ENSMUST00000221351 977 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Limch1Q3UH68 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.76□□□□□ -0.05
Limch1Q3UH68 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.75□□□□□ -0.05
Limch1Q3UH68 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.75□□□□□ -0.05
Limch1Q3UH68 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Gm37489-201ENSMUST00000191883 159 ntBASIC14.75□□□□□ -0.05
Limch1Q3UH68 Gm44124-201ENSMUST00000204159 472 ntBASIC14.75□□□□□ -0.05
Limch1Q3UH68 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.75□□□□□ -0.05
Limch1Q3UH68 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.75□□□□□ -0.05
Limch1Q3UH68 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.75□□□□□ -0.05
Limch1Q3UH68 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.75□□□□□ -0.05
Limch1Q3UH68 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limch1Q3UH68 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms