Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Q3U1D9 Gm12997-201ENSMUST00000120207 640 ntBASIC10.91□□□□□ -0.66
Q3U1D9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Gm28882-201ENSMUST00000185504 314 ntBASIC10.91□□□□□ -0.66
Q3U1D9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.91□□□□□ -0.66
Q3U1D9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Q3U1D9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.91□□□□□ -0.66
Q3U1D9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.91□□□□□ -0.66
Q3U1D9 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.91□□□□□ -0.66
Q3U1D9 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.91□□□□□ -0.66
Q3U1D9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Q3U1D9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Q3U1D9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Q3U1D9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.91□□□□□ -0.66
Q3U1D9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.91□□□□□ -0.66
Q3U1D9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Q3U1D9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Q3U1D9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.9□□□□□ -0.66
Q3U1D9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Q3U1D9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.9□□□□□ -0.66
Q3U1D9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.9□□□□□ -0.66
Q3U1D9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Q3U1D9 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.9□□□□□ -0.66
Q3U1D9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.9□□□□□ -0.66
Q3U1D9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.9□□□□□ -0.66
Q3U1D9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Q3U1D9 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.9□□□□□ -0.66
Q3U1D9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Q3U1D9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Q3U1D9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Q3U1D9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Q3U1D9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Q3U1D9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Q3U1D9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Q3U1D9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Q3U1D9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Q3U1D9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Q3U1D9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.9□□□□□ -0.67
Q3U1D9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Q3U1D9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms