Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm29499-201ENSMUST00000189151 486 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm28329-201ENSMUST00000191208 689 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm29171-201ENSMUST00000191397 486 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm17192-201ENSMUST00000169031 511 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm6612-201ENSMUST00000170777 395 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm8584-201ENSMUST00000171982 758 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 AU015228-201ENSMUST00000121103 1320 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm5071-201ENSMUST00000104922 1035 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm15707-201ENSMUST00000118804 996 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm29548-201ENSMUST00000187012 694 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm28105-201ENSMUST00000187788 694 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.15□□□□□ -0.62
Chd8Q09XV5 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd8Q09XV5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd8Q09XV5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm24328-201ENSMUST00000175104 67 ntBASIC11.15□□□□□ -0.63
Chd8Q09XV5 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm43852-201ENSMUST00000202098 917 ntBASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm8268-201ENSMUST00000209683 458 ntBASIC11.15□□□□□ -0.63
Chd8Q09XV5 Gm39404-201ENSMUST00000216350 313 ntBASIC11.15□□□□□ -0.63
Chd8Q09XV5 AL844586.1-201ENSMUST00000224297 1042 ntBASIC11.15□□□□□ -0.63
Chd8Q09XV5 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.15□□□□□ -0.63
Chd8Q09XV5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms