Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm8227-201ENSMUST00000223306 571 ntBASIC13.63□□□□□ -0.23
Trim43cP86449 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Trim43cP86449 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim43cP86449 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim43cP86449 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trim43cP86449 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm14127-201ENSMUST00000117906 678 ntBASIC13.62□□□□□ -0.23
Trim43cP86449 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm45880-201ENSMUST00000213041 853 ntBASIC13.62□□□□□ -0.23
Trim43cP86449 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.62□□□□□ -0.23
Trim43cP86449 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43cP86449 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43cP86449 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim43cP86449 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43cP86449 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43cP86449 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim43cP86449 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim43cP86449 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.61□□□□□ -0.23
Trim43cP86449 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim43cP86449 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.61□□□□□ -0.23
Trim43cP86449 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Gm5950-201ENSMUST00000213337 772 ntBASIC13.61□□□□□ -0.23
Trim43cP86449 Gm7046-201ENSMUST00000221351 977 ntBASIC13.61□□□□□ -0.23
Trim43cP86449 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.61□□□□□ -0.23
Trim43cP86449 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.61□□□□□ -0.23
Trim43cP86449 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim43cP86449 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim43cP86449 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43cP86449 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Trim43cP86449 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trim43cP86449 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trim43cP86449 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim43cP86449 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Gm6023-201ENSMUST00000118217 606 ntBASIC13.6□□□□□ -0.23
Trim43cP86449 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim43cP86449 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms