Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.22□□□□□ -0.61
SgcbP82349 Daam2-202ENSMUST00000224595 1926 ntBASIC11.22□□□□□ -0.61
SgcbP82349 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SgcbP82349 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.21□□□□□ -0.61
SgcbP82349 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
SgcbP82349 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.21□□□□□ -0.61
SgcbP82349 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SgcbP82349 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
SgcbP82349 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SgcbP82349 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.21□□□□□ -0.61
SgcbP82349 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.21□□□□□ -0.61
SgcbP82349 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcbP82349 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcbP82349 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcbP82349 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcbP82349 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcbP82349 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcbP82349 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Gm15198-201ENSMUST00000117283 177 ntBASIC11.21□□□□□ -0.61
SgcbP82349 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.21□□□□□ -0.61
SgcbP82349 Gm13786-201ENSMUST00000122371 333 ntBASIC11.21□□□□□ -0.61
SgcbP82349 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.21□□□□□ -0.61
SgcbP82349 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.21□□□□□ -0.61
SgcbP82349 Gm45930-201ENSMUST00000221330 292 ntBASIC11.21□□□□□ -0.61
SgcbP82349 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.21□□□□□ -0.61
SgcbP82349 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcbP82349 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcbP82349 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SgcbP82349 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SgcbP82349 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
SgcbP82349 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SgcbP82349 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SgcbP82349 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SgcbP82349 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
SgcbP82349 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Gm13297-201ENSMUST00000120205 934 ntBASIC11.2□□□□□ -0.62
SgcbP82349 Gm16296-201ENSMUST00000159905 325 ntBASIC11.2□□□□□ -0.62
SgcbP82349 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.2□□□□□ -0.62
SgcbP82349 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.2□□□□□ -0.62
SgcbP82349 Gm43822-201ENSMUST00000200285 476 ntBASIC11.2□□□□□ -0.62
SgcbP82349 Gm3961-201ENSMUST00000204425 994 ntBASIC11.2□□□□□ -0.62
SgcbP82349 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.2□□□□□ -0.62
SgcbP82349 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.2□□□□□ -0.62
SgcbP82349 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Gm7046-201ENSMUST00000221351 977 ntBASIC11.2□□□□□ -0.62
SgcbP82349 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.2□□□□□ -0.62
SgcbP82349 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SgcbP82349 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SgcbP82349 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms