Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm45592-201ENSMUST00000209605 1043 ntBASIC20.1■□□□□ 0.81
Cux2P70298 AC114645.1-201ENSMUST00000215831 187 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cux2P70298 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cux2P70298 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Cux2P70298 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC20.1■□□□□ 0.81
Cux2P70298 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC20.09■□□□□ 0.81
Cux2P70298 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC20.09■□□□□ 0.81
Cux2P70298 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cux2P70298 Gm9507-202ENSMUST00000180157 654 ntBASIC20.09■□□□□ 0.81
Cux2P70298 Gm18561-201ENSMUST00000206027 804 ntBASIC20.09■□□□□ 0.81
Cux2P70298 Gm6390-201ENSMUST00000215034 589 ntBASIC20.09■□□□□ 0.81
Cux2P70298 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 AC158388.3-202ENSMUST00000225517 775 ntBASIC20.09■□□□□ 0.81
Cux2P70298 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux2P70298 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cux2P70298 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cux2P70298 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux2P70298 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux2P70298 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cux2P70298 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.08■□□□□ 0.81
Cux2P70298 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux2P70298 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux2P70298 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cux2P70298 Mir181d-201ENSMUST00000102383 72 ntBASIC20.08■□□□□ 0.8
Cux2P70298 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC20.08■□□□□ 0.8
Cux2P70298 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cux2P70298 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC20.08■□□□□ 0.8
Cux2P70298 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC20.08■□□□□ 0.8
Cux2P70298 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cux2P70298 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cux2P70298 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC20.08■□□□□ 0.8
Cux2P70298 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Gm42816-201ENSMUST00000198433 325 ntBASIC20.08■□□□□ 0.8
Cux2P70298 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC20.08■□□□□ 0.8
Cux2P70298 Gm4900-201ENSMUST00000222046 1628 ntBASIC20.08■□□□□ 0.8
Cux2P70298 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC20.08■□□□□ 0.8
Cux2P70298 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux2P70298 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC20.07■□□□□ 0.8
Cux2P70298 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cux2P70298 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC20.07■□□□□ 0.8
Cux2P70298 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Gm38391-201ENSMUST00000191720 4069 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Gm25053-201ENSMUST00000103982 133 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Gm25922-201ENSMUST00000104281 130 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cux2P70298 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC20.07■□□□□ 0.8
Cux2P70298 Gm24679-201ENSMUST00000158762 111 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Gm17192-201ENSMUST00000169031 511 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Gm17070-201ENSMUST00000170463 784 ntBASIC20.07■□□□□ 0.8
Cux2P70298 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Gm25053-202ENSMUST00000199731 132 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Gm29763-201ENSMUST00000205306 616 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Cux2P70298 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Cux2P70298 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cux2P70298 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cux2P70298 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC20.07■□□□□ 0.8
Cux2P70298 Gm36970-201ENSMUST00000193688 1859 ntBASIC20.07■□□□□ 0.8
Cux2P70298 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Cux2P70298 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 AC130823.1-201ENSMUST00000228929 1549 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms