Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Gm25890-201ENSMUST00000177643 165 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Gm22614-201ENSMUST00000178300 165 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Gm22042-201ENSMUST00000082989 165 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Gm26232-201ENSMUST00000083360 166 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Gm24136-201ENSMUST00000083374 165 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Gm26110-201ENSMUST00000083971 165 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lhx1P63006 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lhx1P63006 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.31□□□□□ -0.44
Lhx1P63006 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Gm14760-201ENSMUST00000121831 999 ntBASIC12.31□□□□□ -0.44
Lhx1P63006 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Gm8885-201ENSMUST00000189382 598 ntBASIC12.31□□□□□ -0.44
Lhx1P63006 Gm38317-201ENSMUST00000195564 343 ntBASIC12.31□□□□□ -0.44
Lhx1P63006 Gm44958-201ENSMUST00000203734 736 ntBASIC12.31□□□□□ -0.44
Lhx1P63006 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.31□□□□□ -0.44
Lhx1P63006 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.31□□□□□ -0.44
Lhx1P63006 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.31□□□□□ -0.44
Lhx1P63006 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lhx1P63006 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lhx1P63006 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.31□□□□□ -0.44
Lhx1P63006 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx1P63006 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.3□□□□□ -0.44
Lhx1P63006 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm13665-201ENSMUST00000120830 528 ntBASIC12.3□□□□□ -0.44
Lhx1P63006 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.3□□□□□ -0.44
Lhx1P63006 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm24845-201ENSMUST00000158034 109 ntBASIC12.3□□□□□ -0.44
Lhx1P63006 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.3□□□□□ -0.44
Lhx1P63006 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx1P63006 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.3□□□□□ -0.44
Lhx1P63006 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx1P63006 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms