Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ybx1P62960 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.83□□□□□ -0.36
Ybx1P62960 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Gm14644-201ENSMUST00000116671 647 ntBASIC12.83□□□□□ -0.36
Ybx1P62960 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.83□□□□□ -0.36
Ybx1P62960 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.83□□□□□ -0.36
Ybx1P62960 AU022133-201ENSMUST00000200601 873 ntBASIC12.83□□□□□ -0.36
Ybx1P62960 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Gm7848-201ENSMUST00000210739 718 ntBASIC12.83□□□□□ -0.36
Ybx1P62960 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ybx1P62960 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ybx1P62960 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
Ybx1P62960 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ybx1P62960 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ybx1P62960 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Ybx1P62960 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ybx1P62960 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ybx1P62960 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ybx1P62960 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ybx1P62960 Gm13611-201ENSMUST00000118269 318 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 Gm12266-201ENSMUST00000120311 962 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 Gm13461-201ENSMUST00000120980 662 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.82□□□□□ -0.36
Ybx1P62960 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.82□□□□□ -0.36
Ybx1P62960 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ybx1P62960 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ybx1P62960 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.82□□□□□ -0.36
Ybx1P62960 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Gm42790-201ENSMUST00000201268 969 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ybx1P62960 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ybx1P62960 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Ybx1P62960 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.82□□□□□ -0.36
Ybx1P62960 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.82□□□□□ -0.36
Ybx1P62960 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ybx1P62960 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ybx1P62960 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms