Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Rpl39P62892 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC8.93□□□□□ -0.98
Rpl39P62892 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC8.93□□□□□ -0.98
Rpl39P62892 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39P62892 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Rpl39P62892 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 AC160410.1-201ENSMUST00000219298 1972 ntBASIC8.92□□□□□ -0.98
Rpl39P62892 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC8.92□□□□□ -0.98
Rpl39P62892 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Gm14350-201ENSMUST00000116642 640 ntBASIC8.92□□□□□ -0.98
Rpl39P62892 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC8.92□□□□□ -0.98
Rpl39P62892 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC8.92□□□□□ -0.98
Rpl39P62892 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.92□□□□□ -0.98
Rpl39P62892 AC122305.4-201ENSMUST00000216159 1206 ntBASIC8.92□□□□□ -0.98
Rpl39P62892 AC155258.1-201ENSMUST00000219303 253 ntBASIC8.92□□□□□ -0.98
Rpl39P62892 AC192088.1-201ENSMUST00000227561 301 ntBASIC8.92□□□□□ -0.98
Rpl39P62892 Gm20445-201ENSMUST00000061905 565 ntBASIC8.92□□□□□ -0.98
Rpl39P62892 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rpl39P62892 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rpl39P62892 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39P62892 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39P62892 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl39P62892 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39P62892 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC8.91□□□□□ -0.98
Rpl39P62892 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39P62892 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Rpl39P62892 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39P62892 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl39P62892 AC101945.2-201ENSMUST00000227886 1377 ntBASIC8.91□□□□□ -0.98
Rpl39P62892 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Rpl39P62892 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC8.91□□□□□ -0.98
Rpl39P62892 Gm14701-201ENSMUST00000117156 348 ntBASIC8.91□□□□□ -0.98
Rpl39P62892 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Rpl39P62892 Gm13689-201ENSMUST00000119360 685 ntBASIC8.91□□□□□ -0.98
Rpl39P62892 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Rpl39P62892 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.91□□□□□ -0.98
Rpl39P62892 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl39P62892 Gm18636-201ENSMUST00000218846 1066 ntBASIC8.91□□□□□ -0.98
Rpl39P62892 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC8.91□□□□□ -0.98
Rpl39P62892 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39P62892 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms