Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.39□□□□□ -0.59
Lsm3P62311 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.39□□□□□ -0.59
Lsm3P62311 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.39□□□□□ -0.59
Lsm3P62311 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Gm24447-201ENSMUST00000083977 338 ntBASIC11.39□□□□□ -0.59
Lsm3P62311 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.39□□□□□ -0.59
Lsm3P62311 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.38□□□□□ -0.59
Lsm3P62311 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm3P62311 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm3P62311 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lsm3P62311 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm3P62311 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm3P62311 Gm38144-201ENSMUST00000192790 465 ntBASIC11.38□□□□□ -0.59
Lsm3P62311 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm3P62311 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm3P62311 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.38□□□□□ -0.59
Lsm3P62311 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lsm3P62311 Gm5161-201ENSMUST00000075243 853 ntBASIC11.38□□□□□ -0.59
Lsm3P62311 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.38□□□□□ -0.59
Lsm3P62311 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.38□□□□□ -0.59
Lsm3P62311 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm3P62311 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lsm3P62311 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lsm3P62311 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Lsm3P62311 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.37□□□□□ -0.59
Lsm3P62311 Gm13813-201ENSMUST00000120998 787 ntBASIC11.37□□□□□ -0.59
Lsm3P62311 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.37□□□□□ -0.59
Lsm3P62311 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.37□□□□□ -0.59
Lsm3P62311 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Lsm3P62311 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.37□□□□□ -0.59
Lsm3P62311 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lsm3P62311 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Lsm3P62311 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms