Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.45□□□□□ -0.58
Cdh11P55288 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Gm12203-201ENSMUST00000118235 598 ntBASIC11.45□□□□□ -0.58
Cdh11P55288 Gm12209-201ENSMUST00000120089 596 ntBASIC11.45□□□□□ -0.58
Cdh11P55288 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.45□□□□□ -0.58
Cdh11P55288 Gm17420-201ENSMUST00000164753 153 ntBASIC11.45□□□□□ -0.58
Cdh11P55288 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.45□□□□□ -0.58
Cdh11P55288 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.45□□□□□ -0.58
Cdh11P55288 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdh11P55288 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cdh11P55288 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdh11P55288 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh11P55288 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdh11P55288 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cdh11P55288 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdh11P55288 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdh11P55288 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdh11P55288 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdh11P55288 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdh11P55288 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Gm5370-201ENSMUST00000187187 574 ntBASIC11.44□□□□□ -0.58
Cdh11P55288 Gm29705-201ENSMUST00000212598 474 ntBASIC11.44□□□□□ -0.58
Cdh11P55288 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Gm16372-201ENSMUST00000073088 450 ntBASIC11.44□□□□□ -0.58
Cdh11P55288 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Cdh11P55288 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh11P55288 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdh11P55288 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdh11P55288 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh11P55288 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdh11P55288 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Cdh11P55288 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms