Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.54□□□□□ -0.4
Fdft1P53798 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.54□□□□□ -0.4
Fdft1P53798 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Gm8099-201ENSMUST00000200510 742 ntBASIC12.54□□□□□ -0.4
Fdft1P53798 Gm19163-201ENSMUST00000223313 780 ntBASIC12.54□□□□□ -0.4
Fdft1P53798 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.54□□□□□ -0.4
Fdft1P53798 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Fdft1P53798 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Fdft1P53798 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.53□□□□□ -0.4
Fdft1P53798 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.53□□□□□ -0.4
Fdft1P53798 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.53□□□□□ -0.4
Fdft1P53798 Gm4984-201ENSMUST00000115987 360 ntBASIC12.53□□□□□ -0.4
Fdft1P53798 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Gm12363-201ENSMUST00000122250 668 ntBASIC12.53□□□□□ -0.4
Fdft1P53798 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Gm8602-201ENSMUST00000184045 607 ntBASIC12.53□□□□□ -0.4
Fdft1P53798 Gm4768-201ENSMUST00000206199 686 ntBASIC12.53□□□□□ -0.4
Fdft1P53798 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.53□□□□□ -0.4
Fdft1P53798 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.53□□□□□ -0.4
Fdft1P53798 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.53□□□□□ -0.4
Fdft1P53798 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Fdft1P53798 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fdft1P53798 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fdft1P53798 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Fdft1P53798 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fdft1P53798 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fdft1P53798 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fdft1P53798 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Fdft1P53798 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Fdft1P53798 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fdft1P53798 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Fdft1P53798 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Fdft1P53798 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Fdft1P53798 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 Gm14921-201ENSMUST00000118643 908 ntBASIC12.52□□□□□ -0.41
Fdft1P53798 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.52□□□□□ -0.41
Fdft1P53798 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.52□□□□□ -0.41
Fdft1P53798 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.52□□□□□ -0.41
Fdft1P53798 Gm7029-201ENSMUST00000173226 450 ntBASIC12.52□□□□□ -0.41
Fdft1P53798 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Fdft1P53798 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fdft1P53798 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms