Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdx1P52946 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Pdx1P52946 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdx1P52946 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pdx1P52946 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Pdx1P52946 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
Pdx1P52946 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Pdx1P52946 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdx1P52946 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Pdx1P52946 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pdx1P52946 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pdx1P52946 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdx1P52946 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.39□□□□□ -0.43
Pdx1P52946 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.39□□□□□ -0.43
Pdx1P52946 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.39□□□□□ -0.43
Pdx1P52946 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pdx1P52946 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pdx1P52946 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.39□□□□□ -0.43
Pdx1P52946 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pdx1P52946 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.39□□□□□ -0.43
Pdx1P52946 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pdx1P52946 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pdx1P52946 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdx1P52946 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdx1P52946 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pdx1P52946 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pdx1P52946 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Gm13342-201ENSMUST00000121055 207 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Pdx1P52946 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Gm27501-201ENSMUST00000183599 107 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Gm27243-201ENSMUST00000183964 521 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Gm29396-201ENSMUST00000185659 716 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.38□□□□□ -0.43
Pdx1P52946 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Gm39404-201ENSMUST00000216350 313 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Gm7399-201ENSMUST00000032395 858 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdx1P52946 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.38□□□□□ -0.43
Pdx1P52946 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdx1P52946 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdx1P52946 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Pdx1P52946 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms