Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.09□□□□□ -0.47
Tnfsf4P43488 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm11918-201ENSMUST00000121660 179 ntBASIC12.09□□□□□ -0.47
Tnfsf4P43488 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm7063-201ENSMUST00000186840 981 ntBASIC12.09□□□□□ -0.47
Tnfsf4P43488 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm10012-201ENSMUST00000078252 192 ntBASIC12.09□□□□□ -0.47
Tnfsf4P43488 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf4P43488 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Tnfsf4P43488 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Tnfsf4P43488 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Tnfsf4P43488 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm14928-201ENSMUST00000120198 477 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm9908-201ENSMUST00000211534 448 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms