Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.93□□□□□ -0.34
HttP42859 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.93□□□□□ -0.34
HttP42859 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.93□□□□□ -0.34
HttP42859 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
HttP42859 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HttP42859 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.93□□□□□ -0.34
HttP42859 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.93□□□□□ -0.34
HttP42859 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Gm17944-201ENSMUST00000186351 643 ntBASIC12.93□□□□□ -0.34
HttP42859 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HttP42859 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.93□□□□□ -0.34
HttP42859 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HttP42859 Gm23105-201ENSMUST00000083719 134 ntBASIC12.93□□□□□ -0.34
HttP42859 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HttP42859 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.93□□□□□ -0.34
HttP42859 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.93□□□□□ -0.34
HttP42859 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HttP42859 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.93□□□□□ -0.34
HttP42859 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.93□□□□□ -0.34
HttP42859 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HttP42859 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.92□□□□□ -0.34
HttP42859 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Gm12274-201ENSMUST00000120062 385 ntBASIC12.92□□□□□ -0.34
HttP42859 Gm15196-201ENSMUST00000121406 482 ntBASIC12.92□□□□□ -0.34
HttP42859 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Gm25554-201ENSMUST00000158075 113 ntBASIC12.92□□□□□ -0.34
HttP42859 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HttP42859 Gm5449-201ENSMUST00000081132 357 ntBASIC12.92□□□□□ -0.34
HttP42859 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HttP42859 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.92□□□□□ -0.34
HttP42859 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.92□□□□□ -0.34
HttP42859 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.92□□□□□ -0.34
HttP42859 Gm9625-201ENSMUST00000180422 955 ntBASIC12.92□□□□□ -0.34
HttP42859 Gm9081-201ENSMUST00000182346 991 ntBASIC12.92□□□□□ -0.34
HttP42859 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.92□□□□□ -0.34
HttP42859 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HttP42859 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HttP42859 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HttP42859 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.92□□□□□ -0.34
HttP42859 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.91□□□□□ -0.34
HttP42859 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Gm24279-201ENSMUST00000104236 131 ntBASIC12.91□□□□□ -0.34
HttP42859 Gm15207-201ENSMUST00000119259 442 ntBASIC12.91□□□□□ -0.34
HttP42859 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.91□□□□□ -0.34
HttP42859 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.91□□□□□ -0.34
HttP42859 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.91□□□□□ -0.34
HttP42859 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HttP42859 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms